SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_308300009
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: blood
Biosample name: K562_DMSO_rep1
Genomic region: chr12:54278143-54308149
Size: 30006
Super-enhancer rank 9
Number of SE elements: 1
ChIP density(Case|Control): 145403.0748|5440.0878
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NFE2 ;
ROSE Overlap CBX5 ; HNRNPA1 ; NFE2 ;
ROSE Proximal COPZ1 ; CBX5 ; MIR3198-2 ; LOC102724050 ; MIR148B ; NFE2 ;
ROSE Closest NFE2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_308300009 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers