SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_298100139
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: tumor
Biosample name: VAESBJ_DOX
Genomic region: chr1:228622502-228642351
Size: 19849
Super-enhancer rank 139
Number of SE elements: 10
ChIP density(Case|Control): 77125.2744|65533.4584
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RNA5S9 ;
ROSE Overlap MIR7641-2 ; RNA5S10 ; RNA5S9 ; RNA5S1 ;
ROSE Proximal RNA5S2 ; RNA5S3 ; RNA5S4 ; RHOU ; RNA5S5 ; RNA5S6 ; DUSP5P1 ; RNA5S15 ;
ROSE Closest RNA5S9 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_298100139 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers