SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_297100090
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Renal
Biosample name: 786-O
Genomic region: chr5:179804700-179823178
Size: 18478
Super-enhancer rank 90
Number of SE elements: 3
ChIP density(Case|Control): 50215.8128|3152.3468
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SQSTM1 ;
ROSE Overlap SQSTM1 ; MGAT4B ;
ROSE Proximal LTC4S ; C5orf45 ; MIR1229 ; MGAT4B ;
ROSE Closest SQSTM1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_297100090 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers