SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_289100958
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: hESC
Biosample name: H1_FOXA1_2_Exon_Deletion_PP2
Genomic region: chr9:25675516-25691213
Size: 15697
Super-enhancer rank 958
Number of SE elements: 4
ChIP density(Case|Control): 15359.5145|2806.6236
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TUSC1 ;
ROSE Overlap TUSC1 ;
ROSE Proximal ;
ROSE Closest TUSC1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_289100958 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers