SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_289100915
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: hESC
Biosample name: H1_FOXA1_2_Exon_Deletion_PP2
Genomic region: chr5:1181100-1200788
Size: 19688
Super-enhancer rank 915
Number of SE elements: 4
ChIP density(Case|Control): 18540.1896|5638.6432
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SLC6A19 ;
ROSE Overlap ;
ROSE Proximal SLC6A19 ; CTD-3080P12.3 ; SLC6A18 ;
ROSE Closest SLC6A19 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_289100915 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers