SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_289100388
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: hESC
Biosample name: H1_FOXA1_2_Exon_Deletion_PP2
Genomic region: chr19:925238-933948
Size: 8710
Super-enhancer rank 388
Number of SE elements: 3
ChIP density(Case|Control): 26243.23|4564.04
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ARID3A ;
ROSE Overlap ARID3A ;
ROSE Proximal KISS1R ; MED16 ; R3HDM4 ;
ROSE Closest ARID3A ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_289100388 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers