SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_289100091
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: hESC
Biosample name: H1_FOXA1_2_Exon_Deletion_PP2
Genomic region: chr6:34224129-34237399
Size: 13270
Super-enhancer rank 91
Number of SE elements: 3
ChIP density(Case|Control): 46833.811|5915.766
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HMGA1 ;
ROSE Overlap HMGA1 ;
ROSE Proximal MIR6835 ; HMGA1 ; C6orf1 ;
ROSE Closest HMGA1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_289100091 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers