SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_286600345
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast
Biosample name: NEG Acute DMSO
Genomic region: chr17:40064309-40078414
Size: 14105
Super-enhancer rank 345
Number of SE elements: 6
ChIP density(Case|Control): 23253.503|3895.801
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: THRA ;
ROSE Overlap THRA ;
ROSE Proximal CSF3 ; NR1D1 ; MSL1 ; MIR6884 ; MED24 ; SNORD124 ; THRA ;
ROSE Closest THRA ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_286600345 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers