SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_275501230
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-KO2 (IDH1-R132H)
Genomic region: chr3:10190520-10207177
Size: 16657
Super-enhancer rank 1230
Number of SE elements: 3
ChIP density(Case|Control): 24537.4267|929.4606
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: IRAK2 ;
ROSE Overlap IRAK2 ;
ROSE Proximal TATDN2 ; VHL ;
ROSE Closest IRAK2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_275501230 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers