SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_275501180
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-KO2 (IDH1-R132H)
Genomic region: chr11:64851191-64886241
Size: 35050
Super-enhancer rank 1180
Number of SE elements: 9
ChIP density(Case|Control): 27030.56|2726.89
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: EHD1 ;
ROSE Overlap EHD1 ;
ROSE Proximal GPHA2 ; ATG2A ; MEN1 ; MAP4K2 ; PPP2R5B ; MIR6749 ; CDC42BPG ; MIR192 ; MIR6750 ; MIR194-2 ;
ROSE Closest EHD1 ;
Lasso ;
PreSTIGE ;
ABC CDCA5 ; ZFPL1 ; TM7SF2 ; ZNHIT2 ; FAU ; MRPL49 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_275501180 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers