SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_275501068
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-KO2 (IDH1-R132H)
Genomic region: chr11:111554642-111563799
Size: 9157
Super-enhancer rank 1068
Number of SE elements: 3
ChIP density(Case|Control): 26478.3812|693.1849
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LAYN ;
ROSE Overlap LAYN ;
ROSE Proximal C11orf88 ; BTG4 ; SIK2 ; MIR34B ; LAYN ; MIR34C ;
ROSE Closest LAYN ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_275501068 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers