SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_273700447
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: lymph node
Biosample name: LY3-Diagenode
Genomic region: chr1:161043561-161049201
Size: 5640
Super-enhancer rank 447
Number of SE elements: 1
ChIP density(Case|Control): 66517.596|1087.956
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: USF1 ;
ROSE Overlap USF1 ; ARHGAP30 ;
ROSE Proximal KLHDC9 ; ARHGAP30 ; TSTD1 ; PVRL4 ; F11R ;
ROSE Closest USF1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_273700447 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers