SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_273700316
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: lymph node
Biosample name: LY3-Diagenode
Genomic region: chr19:16062962-16083301
Size: 20339
Super-enhancer rank 316
Number of SE elements: 4
ChIP density(Case|Control): 86747.8689|3368.1384
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TPM4 ;
ROSE Overlap TPM4 ;
ROSE Proximal LINC00905 ; LINC00661 ; RAB8A ;
ROSE Closest TPM4 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_273700316 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers