SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_270300042
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast
Biosample name: MCF10a_serumWD_back3h
Genomic region: chr1:201456631-201490133
Size: 33502
Super-enhancer rank 42
Number of SE elements: 6
ChIP density(Case|Control): 69771.2652|17464.5926
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PHLDA3 ;
ROSE Overlap CSRP1 ; PHLDA3 ;
ROSE Proximal TNNI1 ; CSRP1 ; RPS10P7 ;
ROSE Closest PHLDA3 ;
Lasso ;
PreSTIGE ;
ABC TNNI1 ; CSRP1 ; PHLDA3 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_270300042 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers