SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_269901026
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast
Biosample name: MCF10a_in_serum
Genomic region: chr12:96193826-96199657
Size: 5831
Super-enhancer rank 1026
Number of SE elements: 2
ChIP density(Case|Control): 19397.4046|2657.1867
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ELK3 ;
ROSE Overlap ELK3 ;
ROSE Proximal ;
ROSE Closest ELK3 ;
Lasso ;
PreSTIGE ;
ABC AMDHD1 ; NTN4 ; LOC105369920 ; HAL ; PGAM1P5 ; LOC105369921 ; SNRPF ; CCDC38 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269901026 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers