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Super-enhancer overview

SE ID: SE_02_269900966
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast
Biosample name: MCF10a_in_serum
Genomic region: chr19:2055895-2069611
Size: 13716
Super-enhancer rank 966
Number of SE elements: 3
ChIP density(Case|Control): 21398.3316|3711.5496
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MKNK2 ;
ROSE Overlap ;
ROSE Proximal IZUMO4 ; MKNK2 ; MOB3A ; BTBD2 ;
ROSE Closest MKNK2 ;
Lasso ;
PreSTIGE ;
ABC MKNK2 ; IZUMO4 ; MOB3A ; BTBD2 ; CSNK1G2 ; ABHD17A ; ADAT3 ; SCAMP4 ; AP3D1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269900966 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers