SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269900764
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast
Biosample name: MCF10a_in_serum
Genomic region: chr2:231642032-231667018
Size: 24986
Super-enhancer rank 764
Number of SE elements: 4
ChIP density(Case|Control): 25798.045|4437.5136
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PTMA ;
ROSE Overlap ;
ROSE Proximal PTMA ; MIR1244-2 ; C2orf57 ;
ROSE Closest PTMA ;
Lasso ;
PreSTIGE ;
ABC ITM2C ; CAB39 ; LINC01907 ; SLC16A14 ; SP140L ; SP100 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269900764 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers