SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269900752
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast
Biosample name: MCF10a_in_serum
Genomic region: chr2:1707422-1730892
Size: 23470
Super-enhancer rank 752
Number of SE elements: 3
ChIP density(Case|Control): 25000.244|3515.806
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PXDN ;
ROSE Overlap PXDN ;
ROSE Proximal ;
ROSE Closest PXDN ;
Lasso ;
PreSTIGE ;
ABC PXDN ; ACP1 ; SH3YL1 ; FAM110C ; TMEM18 ; TSSC1 ; TRAPPC12 ; ADI1 ; RPS7 ; RNASEH1-AS1 ; RNASEH1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269900752 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers