SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269900726
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast
Biosample name: MCF10a_in_serum
Genomic region: chr12:6961029-6964284
Size: 3255
Super-enhancer rank 726
Number of SE elements: 1
ChIP density(Case|Control): 24003.672|2113.146
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR200C ;
ROSE Overlap MIR200C ; PTPN6 ; MIR141 ;
ROSE Proximal ENO2 ; SCARNA12 ; PHB2 ; RNU7-1 ; C12orf57 ; ATN1 ; EMG1 ;
ROSE Closest MIR200C ;
Lasso ;
PreSTIGE ;
ABC TPI1 ; CDCA3 ; USP5 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269900726 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers