SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269900628
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast
Biosample name: MCF10a_in_serum
Genomic region: chr5:139293318-139295817
Size: 2499
Super-enhancer rank 628
Number of SE elements: 1
ChIP density(Case|Control): 25767.189|1776.0393
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MATR3 ;
ROSE Overlap MATR3 ;
ROSE Proximal PAIP2 ; SNORA74A ; SNHG4 ;
ROSE Closest MATR3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269900628 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers