SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269900594
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast
Biosample name: MCF10a_in_serum
Genomic region: chr5:10287883-10311192
Size: 23309
Super-enhancer rank 594
Number of SE elements: 3
ChIP density(Case|Control): 30359.9725|5626.7926
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CMBL ;
ROSE Overlap CMBL ;
ROSE Proximal CCT5 ; FAM173B ; MARCH6 ;
ROSE Closest CMBL ;
Lasso ;
PreSTIGE ;
ABC CMBL ; ROPN1L ; MARCH6 ; ROPN1L-AS1 ; DAP ; CCT5 ; FAM173B ; ANKRD33B ; LINC02112 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269900594 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers