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Super-enhancer overview

SE ID: SE_02_269900586
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast
Biosample name: MCF10a_in_serum
Genomic region: chr18:9643052-9659155
Size: 16103
Super-enhancer rank 586
Number of SE elements: 3
ChIP density(Case|Control): 28523.2439|3642.4986
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PPP4R1-AS1 ;
ROSE Overlap ;
ROSE Proximal PPP4R1-AS1 ; RAB31 ; PPP4R1 ;
ROSE Closest PPP4R1-AS1 ;
Lasso ;
PreSTIGE ;
ABC PPP4R1-AS1 ; PPP4R1 ; RAB31 ; RALBP1 ; LOC101927410 ; RAB12 ; GACAT2 ; LINC01254 ; NDUFV2 ; TWSG1 ; NAPG ; VAPA ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269900586 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers