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Super-enhancer overview

SE ID: SE_02_269900549
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast
Biosample name: MCF10a_in_serum
Genomic region: chr17:72587508-72603665
Size: 16157
Super-enhancer rank 549
Number of SE elements: 2
ChIP density(Case|Control): 30817.8618|4743.6952
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LINC00673 ;
ROSE Overlap LINC00511 ; LINC00673 ;
ROSE Proximal ;
ROSE Closest LINC00673 ;
Lasso ;
PreSTIGE ;
ABC CD300A ; CD300C ; CD300E ; CD300LD ; LOC100130520 ; NAT9 ; RPL38 ; BTBD17 ; SLC9A3R1 ; TMEM104 ; GPRC5C ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269900549 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers