SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269900397
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast
Biosample name: MCF10a_in_serum
Genomic region: chr9:33158510-33167272
Size: 8762
Super-enhancer rank 397
Number of SE elements: 1
ChIP density(Case|Control): 36751.3328|4582.526
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: B4GALT1-AS1 ;
ROSE Overlap B4GALT1-AS1 ; B4GALT1 ;
ROSE Proximal B4GALT1-AS1 ;
ROSE Closest B4GALT1-AS1 ;
Lasso ;
PreSTIGE ;
ABC SPINK4 ; BAG1 ; CHMP5 ; NOL6 ; SUGT1P1 ; B4GALT1-AS1 ; B4GALT1 ; SMU1 ; DNAJA1 ; APTX ; ACO1 ; NFX1 ; ANKRD18B ; DDX58 ; NDUFB6 ; AQP3 ; ANXA2P2 ; TOPORS ; TOPORS-AS1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269900397 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers