SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269900369
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast
Biosample name: MCF10a_in_serum
Genomic region: chr12:12870441-12902172
Size: 31731
Super-enhancer rank 369
Number of SE elements: 6
ChIP density(Case|Control): 40821.9315|7875.6342
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GPRC5A ;
ROSE Overlap RPL13AP20 ; GPRC5A ;
ROSE Proximal MIR614 ; GPRC5D ;
ROSE Closest GPRC5A ;
Lasso ;
PreSTIGE ;
ABC CDKN1B ; MANSC1 ; LRP6 ; ETV6 ; LOH12CR2 ; LINC01559 ; BORCS5 ; DUSP16 ; CREBL2 ; GPR19 ; APOLD1 ; HTR7P1 ; HEBP1 ; LOC100506314 ; GPRC5A ; DDX47 ; FAM234B ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269900369 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers