SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269900325
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast
Biosample name: MCF10a_in_serum
Genomic region: chr5:43063704-43067989
Size: 4285
Super-enhancer rank 325
Number of SE elements: 1
ChIP density(Case|Control): 37162.091|1926.9645
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC100132356 ;
ROSE Overlap LOC100506639 ; LOC100132356 ; LOC648987 ;
ROSE Proximal LOC648987 ; LOC153684 ; ANXA2R ;
ROSE Closest LOC100132356 ;
Lasso ;
PreSTIGE ;
ABC LOC100132356 ; LOC153684 ; FLJ32255 ; C5orf34 ; HMGCS1 ; ZNF131 ; LOC100506639 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269900325 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers