SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269900305
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast
Biosample name: MCF10a_in_serum
Genomic region: chr17:43240550-43252425
Size: 11875
Super-enhancer rank 305
Number of SE elements: 4
ChIP density(Case|Control): 46422.9375|10154.3125
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RNU2-1 ;
ROSE Overlap RNU2-1 ;
ROSE Proximal TMEM106A ; LINC00854 ;
ROSE Closest RNU2-1 ;
Lasso ;
PreSTIGE ;
ABC HEXIM2 ; LOC105371795 ; KIF18B ; PLCD3 ; ACBD4 ; MAP3K14-AS1 ; FMNL1 ; HEXIM1 ; MAP3K14 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269900305 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers