SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269900238
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast
Biosample name: MCF10a_in_serum
Genomic region: chr1:8173511-8225554
Size: 52043
Super-enhancer rank 238
Number of SE elements: 8
ChIP density(Case|Control): 53593.8814|11881.4169
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SLC45A1 ;
ROSE Overlap LOC102724539 ;
ROSE Proximal ;
ROSE Closest LOC102724539 ;
Lasso ;
PreSTIGE ;
ABC ERRFI1 ; LINC01714 ; SLC45A1 ; PER3 ; PARK7 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269900238 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers