SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269900231
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast
Biosample name: MCF10a_in_serum
Genomic region: chr19:12777922-12794349
Size: 16427
Super-enhancer rank 231
Number of SE elements: 3
ChIP density(Case|Control): 48244.4563|5752.7354
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR5684 ;
ROSE Overlap JUNB ; MIR5684 ;
ROSE Proximal BEST2 ; RTBDN ; ASNA1 ; HOOK2 ; RNASEH2A ; PRDX2 ; C19orf43 ; MAST1 ;
ROSE Closest MIR5684 ;
Lasso ;
PreSTIGE ;
ABC WDR83OS ; MAN2B1 ; WDR83 ; DHPS ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269900231 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers