SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269900225
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast
Biosample name: MCF10a_in_serum
Genomic region: chr6:2988141-2991308
Size: 3167
Super-enhancer rank 225
Number of SE elements: 1
ChIP density(Case|Control): 45211.4586|2289.741
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LINC01011 ;
ROSE Overlap LINC01011 ;
ROSE Proximal HTATSF1P2 ; SERPINB6 ; NQO2 ; LINC01011 ;
ROSE Closest LINC01011 ;
Lasso ;
PreSTIGE ;
ABC SERPINB6 ; LINC01011 ; GMDS-AS1 ; PSMG4 ; TUBB2A ; BPHL ; RIPK1 ; FOXC1 ; GMDS ; LOC101927759 ; HTATSF1P2 ; NQO2 ; SERPINB9P1 ; SERPINB1 ; WRNIP1 ; LOC100507194 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269900225 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers