SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269900152
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast
Biosample name: MCF10a_in_serum
Genomic region: chr12:110537380-110585668
Size: 48288
Super-enhancer rank 152
Number of SE elements: 9
ChIP density(Case|Control): 63860.88|13443.3792
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PPTC7 ;
ROSE Overlap PPTC7 ;
ROSE Proximal RAD9B ; TCTN1 ; VPS29 ;
ROSE Closest PPTC7 ;
Lasso ;
PreSTIGE ;
ABC IFT81 ; ATP2A2 ; ANAPC7 ; ARPC3 ; ANKRD13A ; GIT2 ; GLTP ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269900152 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers