SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269900130
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast
Biosample name: MCF10a_in_serum
Genomic region: chr7:27096202-27116293
Size: 20091
Super-enhancer rank 130
Number of SE elements: 4
ChIP density(Case|Control): 63111.8583|9521.1249
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HOXA2 ;
ROSE Overlap HOXA2 ; HOXA3 ; HOTAIRM1 ;
ROSE Proximal HOXA-AS3 ; HOXA5 ; HOXA-AS2 ; HOXA7 ; HOXA1 ; HOXA4 ; HOXA9 ; HOTAIRM1 ; HOXA6 ;
ROSE Closest HOXA2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269900130 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers