SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269900108
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast
Biosample name: MCF10a_in_serum
Genomic region: chr6:10411438-10421179
Size: 9741
Super-enhancer rank 108
Number of SE elements: 1
ChIP density(Case|Control): 61755.0177|3133.6797
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TFAP2A ;
ROSE Overlap TFAP2A ; TFAP2A-AS1 ;
ROSE Proximal MIR5689 ; LINC00518 ;
ROSE Closest TFAP2A ;
Lasso ;
PreSTIGE ;
ABC TFAP2A-AS1 ; TFAP2A ; MIR5689HG ; HIPSTR ; LINC00518 ; LOC100506207 ; SLC35B3 ; TMEM14B ; TMEM14C ; PAK1IP1 ; GCNT2 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269900108 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers