SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269900044
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast
Biosample name: MCF10a_in_serum
Genomic region: chr18:3446532-3454857
Size: 8325
Super-enhancer rank 44
Number of SE elements: 1
ChIP density(Case|Control): 78385.7025|4570.425
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TGIF1 ;
ROSE Overlap TGIF1 ;
ROSE Proximal TGIF1 ; GAPLINC ;
ROSE Closest TGIF1 ;
Lasso ;
PreSTIGE ;
ABC TGIF1 ; NDC80 ; CBX3P2 ; SMCHD1 ; LPIN2 ; MYL12A ; LOC104968399 ; MYL12B ; ZBTB14 ; LINC00667 ; LINC00526 ; DLGAP1-AS2 ; DLGAP1-AS1 ; GAPLINC ; METTL4 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269900044 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers