SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269900006
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast
Biosample name: MCF10a_in_serum
Genomic region: chr19:40714303-40722375
Size: 8072
Super-enhancer rank 6
Number of SE elements: 1
ChIP density(Case|Control): 123383.7488|4647.0504
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ITPKC ;
ROSE Overlap ADCK4 ; ITPKC ;
ROSE Proximal NUMBL ; C19orf54 ; SNRPA ;
ROSE Closest ITPKC ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269900006 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers