SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269900003
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Breast
Biosample name: MCF10a_in_serum
Genomic region: chr12:124904366-124940681
Size: 36315
Super-enhancer rank 3
Number of SE elements: 8
ChIP density(Case|Control): 173204.3925|14823.783
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR5188 ;
ROSE Overlap MIR5188 ; UBC ;
ROSE Proximal SCARB1 ; DHX37 ;
ROSE Closest MIR5188 ;
Lasso ;
PreSTIGE ;
ABC TCTN2 ; CCDC92 ; RFLNA ; ZNF664 ; NCOR2 ; ATP6V0A2 ; AACS ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269900003 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers