SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269301127
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-KO1 (IDH1-R132H)
Genomic region: chr6:27834877-27840685
Size: 5808
Super-enhancer rank 1127
Number of SE elements: 1
ChIP density(Case|Control): 24145.0176|491.3568
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HIST1H2AK ;
ROSE Overlap HIST1H2AK ; HIST1H2BN ;
ROSE Proximal HIST1H2AL ; HIST1H3I ; HIST1H2BM ; HIST1H2AJ ; HIST1H2AI ; HIST1H4K ; HIST1H4L ; HIST1H2BL ; HIST1H4J ; HIST1H1B ; HIST1H3H ;
ROSE Closest HIST1H2AK ;
Lasso ;
PreSTIGE ;
ABC HIST1H3I ; HIST1H4L ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269301127 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers