SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269301066
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-KO1 (IDH1-R132H)
Genomic region: chr1:181076967-181118433
Size: 41466
Super-enhancer rank 1066
Number of SE elements: 7
ChIP density(Case|Control): 28657.1526|3964.1496
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: IER5 ;
ROSE Overlap IER5 ;
ROSE Proximal MR1 ;
ROSE Closest IER5 ;
Lasso ;
PreSTIGE ;
ABC MR1 ; IER5 ; STX6 ; XPR1 ; ACBD6 ; KIAA1614 ; KIAA1614-AS1 ; LHX4 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269301066 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers