SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269300954
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-KO1 (IDH1-R132H)
Genomic region: chr5:82386594-82407496
Size: 20902
Super-enhancer rank 954
Number of SE elements: 3
ChIP density(Case|Control): 28182.1666|1927.1644
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ATP6AP1L ;
ROSE Overlap ;
ROSE Proximal ;
ROSE Closest ATP6AP1L ;
Lasso ;
PreSTIGE ;
ABC XRCC4 ; TMEM167A ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269300954 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers