SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_269300822
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-KO1 (IDH1-R132H)
Genomic region: chr9:37929902-37977327
Size: 47425
Super-enhancer rank 822
Number of SE elements: 10
ChIP density(Case|Control): 34378.3825|5880.7
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SLC25A51 ;
ROSE Overlap SHB ;
ROSE Proximal SLC25A51 ;
ROSE Closest SLC25A51 ;
Lasso ;
PreSTIGE ;
ABC POLR1E ; GRHPR ; EBLN3P ; FBXO10 ; FAM201A ; ANKRD18A ; ALDH1B1 ; SHB ; SLC25A51 ; DCAF10 ; EXOSC3 ; TOMM5 ; TRMT10B ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269300822 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers