SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_269300813
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-KO1 (IDH1-R132H)
Genomic region: chr7:26153476-26204140
Size: 50664
Super-enhancer rank 813
Number of SE elements: 13
ChIP density(Case|Control): 32840.4048|4007.5224
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HNRNPA2B1 ;
ROSE Overlap HNRNPA2B1 ; CBX3 ; NFE2L3 ;
ROSE Proximal ;
ROSE Closest HNRNPA2B1 ;
Lasso ;
PreSTIGE ;
ABC NFE2L3 ; SNX10 ; C7orf31 ; CBX3 ; HNRNPA2B1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269300813 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers