SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269300795
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-KO1 (IDH1-R132H)
Genomic region: chr6:2975851-3013938
Size: 38087
Super-enhancer rank 795
Number of SE elements: 5
ChIP density(Case|Control): 33063.3247|3724.9086
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NQO2 ;
ROSE Overlap LINC01011 ; NQO2 ;
ROSE Proximal HTATSF1P2 ; SERPINB6 ; LINC01011 ;
ROSE Closest NQO2 ;
Lasso ;
PreSTIGE ;
ABC SERPINB6 ; LINC01011 ; PSMG4 ; LOC101927759 ; HTATSF1P2 ; NQO2 ; RIPK1 ; BPHL ; TUBB2A ; SERPINB9 ; SERPINB9P1 ; SERPINB1 ; WRNIP1 ; GMDS-AS1 ; GMDS ; FOXC1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269300795 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers