SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_269300718
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-KO1 (IDH1-R132H)
Genomic region: chr7:92620872-92645652
Size: 24780
Super-enhancer rank 718
Number of SE elements: 6
ChIP density(Case|Control): 33400.962|2205.42
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: FAM133B ;
ROSE Overlap CDK6 ;
ROSE Proximal FAM133B ;
ROSE Closest FAM133B ;
Lasso ;
PreSTIGE ;
ABC VPS50 ; AKAP9 ; GATAD1 ; PEX1 ; RBM48 ; FAM133DP ; FAM133B ; SAMD9L ; SAMD9 ; LOC101927497 ; CDK6 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269300718 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers