SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269300662
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-KO1 (IDH1-R132H)
Genomic region: chr19:42873583-42900269
Size: 26686
Super-enhancer rank 662
Number of SE elements: 3
ChIP density(Case|Control): 34809.2184|1825.3224
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PSG1 ;
ROSE Overlap PSG1 ;
ROSE Proximal PSG6 ; PSG10P ; PSG7 ;
ROSE Closest PSG1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269300662 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers