SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269300591
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-KO1 (IDH1-R132H)
Genomic region: chr9:4808739-4842438
Size: 33699
Super-enhancer rank 591
Number of SE elements: 6
ChIP density(Case|Control): 38750.4801|3595.6833
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RCL1 ;
ROSE Overlap RCL1 ;
ROSE Proximal MIR101-2 ;
ROSE Closest RCL1 ;
Lasso ;
PreSTIGE ;
ABC AK3 ; RCL1 ; JAK2 ; SPATA6L ; CDC37L1-AS1 ; CDC37L1 ; PLPP6 ; INSL4 ; PLGRKT ; CD274 ; RIC1 ; ERMP1 ; RANBP6 ; SLC1A1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269300591 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers