SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269300401
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-KO1 (IDH1-R132H)
Genomic region: chr9:22101397-22119693
Size: 18296
Super-enhancer rank 401
Number of SE elements: 4
ChIP density(Case|Control): 46448.0552|2565.0992
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CDKN2B ;
ROSE Overlap CDKN2B-AS1 ;
ROSE Proximal ;
ROSE Closest CDKN2B ;
Lasso ;
PreSTIGE ;
ABC MIR31HG ; MTAP ; ELAVL2 ; LINC01239 ; MLLT3 ; FOCAD-AS1 ; DMRTA1 ; CDKN2B ; CDKN2B-AS1 ; CDKN2A ; KLHL9 ; HACD4 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269300401 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers