SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269300378
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-KO1 (IDH1-R132H)
Genomic region: chr17:19157619-19232948
Size: 75329
Super-enhancer rank 378
Number of SE elements: 12
ChIP density(Case|Control): 51577.7663|6380.3663
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SNORD3C ;
ROSE Overlap GRAPL ; SNORD3C ; LOC388436 ; LOC79999 ; SNORD3A ;
ROSE Proximal EPN2 ; EPN2-IT1 ; SNORD3D ;
ROSE Closest SNORD3C ;
Lasso ;
PreSTIGE ;
ABC EPN2-AS1 ; EPN2 ; EPN2-IT1 ; CCDC144B ; B9D1 ; MAPK7 ; RNF112 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269300378 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers