SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_269300311
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-KO1 (IDH1-R132H)
Genomic region: chr3:16048440-16151652
Size: 103212
Super-enhancer rank 311
Number of SE elements: 18
ChIP density(Case|Control): 58128.9984|7090.6644
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GALNT15 ;
ROSE Overlap ;
ROSE Proximal GALNT15 ;
ROSE Closest GALNT15 ;
Lasso ;
PreSTIGE ;
ABC RFTN1 ; LINC00690 ; PLCL2 ; OXNAD1 ; DPH3 ; GALNT15 ; ANKRD28 ; COLQ ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269300311 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers