SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_269300242
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-KO1 (IDH1-R132H)
Genomic region: chr5:367775-411425
Size: 43650
Super-enhancer rank 242
Number of SE elements: 8
ChIP density(Case|Control): 63790.11|5521.725
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: EXOC3-AS1 ;
ROSE Overlap AHRR ;
ROSE Proximal EXOC3-AS1 ; EXOC3 ;
ROSE Closest EXOC3-AS1 ;
Lasso ;
PreSTIGE ;
ABC CLPTM1L ; CEP72 ; LOC100996325 ; SLC9A3-AS1 ; PP7080 ; EXOC3 ; EXOC3-AS1 ; HRAT5 ; PDCD6 ; BRD9 ; TRIP13 ; LPCAT1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269300242 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers