SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_269300241
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: CIC-KO1 (IDH1-R132H)
Genomic region: chr9:33494438-33550894
Size: 56456
Super-enhancer rank 241
Number of SE elements: 9
ChIP density(Case|Control): 64958.2736|6515.0224
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ANKRD18B ;
ROSE Overlap SUGT1P1 ; ANKRD18B ;
ROSE Proximal AQP3 ; MIR6851 ; NOL6 ;
ROSE Closest ANKRD18B ;
Lasso ;
PreSTIGE ;
ABC PTENP1-AS ; PTENP1 ; ANXA2P2 ; ANKRD18B ; SUGT1P1 ; NOL6 ; AQP3 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_269300241 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers